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Contents:
Data QC
ALL data PCA
rm sample redo DESeq2
DE overlap
CC DD DE exp overlap
Cluster analysis of CC DD overlap DE genes FC
CC DD overlap DE clusters match gene number
Stage specific DE
CC stage specific DE gene analysis
DD stage specific DE gene analysis
heatmap of sugar corr gene
sugar_corr_gene_exp_pre_4heatmap1
sugar_corr_gene_exp_pre_4heatmap2
Do heatmap1-2
Network
Network 1
complex network (gene Suc TF)
style 3
complex network (Acetyl-CoA gene TF)
GRN Network
regulon heatmap
.rst
.pdf
Data QC
Data QC
#
QC and re-analysis
